LiteFold

UniProtKB

Processed UniProtKB release — comprehensive, high-quality protein sequence and functional annotation knowledgebase (Swiss-Prot + TrEMBL) reformatted for ML pipelines.

Original source

Rows: 52,367,639
On disk: —
Downloads: 86
Updated: May 27

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Column statistics

How the columns are distributed

Over 733 rows of default/train

access_note

string_label

Default index over UniProtKB files. Load configs sprot, sprot_varsplic, or trembl for protein-entry rows.100%

compression

string_label

gzip74%
zstd25%

dataset_id

string_label

uniprotkb100%

download_pattern

string_label

sequences/sequence_uniprotkb_uniprot_trembl.fasta.gz/shard-*.fasta.zst25%
tables/source_set=trembl/split=validation/*.jsonl.gz25%
tables/source_set=trembl/split=train/*.jsonl.gz25%

file_id

string_text

min: 9
median: 75
mean: 74.88
max: 87

is_metadata_records

bool

False100%
True0%

is_sequence_shard

bool

False75%
True25%

is_table_shard

bool

True74%
False26%

path

string_text

min: 9
median: 75
mean: 74.88
max: 87

records_in_source

int

min: -1
median: 203M
mean: 199M
max: 203M

records_in_table_split

int

min: -1
median: 20M
mean: 50M
max: 162M

records_total

int

min: 203M
median: 203M
mean: 203M
max: 203M

repo_id

string_label

LiteFold/UniProtKB100%

residues_in_source

int

min: -1
median: 75.5B
mean: 74.3B
max: 75.5B

residues_total

int

min: 75.7B
median: 75.7B
mean: 75.7B
max: 75.7B

role

string_label

protein_entry_table_shard74%
sequence_shard25%
source_manifest0%

shard_index

int

min: -1
median: 97
mean: 98.25
max: 202

shards_in_source

int

min: -1
median: 203
mean: 199.68
max: 203

size_bytes

int

min: 484
median: 11M
mean: 180M
max: 74.2B

source_file

string_label

sequence/uniprotkb/uniprot_trembl.fasta.gz98%
sequence/uniprotkb/uniprot_sprot.fasta.gz1%
1%

source_set

string_label

trembl98%
1%
sprot_varsplic1%

source_sha

string_label

ea4b6633410d5e2158cdb0b97fdcabd70bce3c27100%

source_slug

string_label

sequence_uniprotkb_uniprot_trembl.fasta.gz98%
sequence_uniprotkb_uniprot_sprot_varsplic.fasta.gz1%
1%

split_bucket

int

min: 1
median: 5
mean: 4.96
max: 9

table_split

string_label

26%
validation25%
train25%

total_sequence_shards

int

min: 205
median: 205
mean: 205
max: 205

Provenance

Licence: cc-by-4.0
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