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Corollary
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  2. Datasets
  3. LiteFold/PDB

LiteFold

PDB

Hub-packaged index over the Protein Data Bank mmCIF entries — the global archive of experimentally-determined 3D structures of biological macromolecules.

Original source
Rows
98,824
On disk
8.3 MB
Downloads
425

Last 30 days

Updated
May 27

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Column statistics

How the columns are distributed

Over 88,873 rows of default/train

accession_date

string_text
min
8
median
8
mean
8
max
8

accession_date_iso

datetime

authors

string_text

Splits

2
  • default/train
  • default/test

Query support

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  • Column statistics

Provenance

Licence
cc0-1.0
Likes
2

Fields

BiologyMedicineGenomics
min
6
median
47
mean
63.79
max
999

classification

string_text
min
0
median
13
mean
14.55
max
67

experimental_method

string_label
  • X-RAY DIFFRACTION83%
  • ELECTRON MICROSCOPY12%
  • SOLUTION NMR5%

has_entries_idx_metadata

bool
  • True100%

mmcif_blob_id

string_text
min
40
median
40
mean
40
max
40

mmcif_file_size_bytes

int
min
7,323
median
158k
mean
316k
max
102M

mmcif_path

string_text
min
20
median
20
mean
20
max
20

pdb_id

string_text
min
4
median
4
mean
4
max
4

pdb_url

string_text
min
35
median
35
mean
35
max
35

raw_resolution

string_text
min
0
median
3
mean
3.48
max
11

rcsb_download_url

string_text
min
43
median
43
mean
43
max
43

resolution_angstrom

float
min
0
median
2.10
mean
2.33
max
50

4.9% empty

resolution_is_unknown

bool
  • False95%
  • True5%

source_organism

string_text
min
0
median
20
mean
23.31
max
798

split_bucket

int
min
1
median
5
mean
5.00
max
9

title

string_text
min
3
median
75
mean
81.25
max
390