Corollary

Research

  • Ask

Library

  • Catalog

Account

  • Overview
  • Jobs
  • Usage
  • Billing
Settings
Corollary
  1. Catalog
  2. Datasets
  3. LiteFold/CATH

LiteFold

CATH

CATH domain classification — hierarchical classification of protein domain structures by class, architecture, topology, and homologous superfamily.

Original source
Rows
601,328
On disk
30 MB
Downloads
84

Last 30 days

Updated
May 27

Explore

Read the real rows without downloading anything

Reading rows…

LiveRead from LiteFold/CATH at the moment you asked. Nothing is cached or stored — every row above came from that request.

Column statistics

How the columns are distributed

Over 541,123 rows of default/train

architecture_code

string_label
  • 3.4020%
  • 3.3014%
  • 2.6014%

architecture_example_domain_id

string_label
  • 1byiA0020%
  • 6n3dA0114%
  • 4unuA00

Splits

2
  • default/train
  • default/test

Query support

  • Row preview
  • Paginated browse
  • Full-text search
  • SQL filter
  • Column statistics

Provenance

Licence
cc-by-4.0
Likes
1

Fields

BiologyGenomics
14%

architecture_name

string_label
  • 3-Layer(aba) Sandwich20%
  • 2-Layer Sandwich14%
  • Sandwich14%

architecture_number

int
min
10
median
40
mean
39.16
max
180

cath_code

string_text
min
9
median
11
mean
10.96
max
13

cath_version

string_label
  • 4.4.0100%

chain_id

string_label
  • A37%
  • B21%
  • C9%

class_code

string_label
  • 351%
  • 226%
  • 121%

class_example_domain_id

string_label
  • 1byiA0051%
  • 4unuA0026%
  • 6e1fA0021%

class_name

string_label
  • Alpha Beta51%
  • Mainly Beta26%
  • Mainly Alpha21%

class_number

int
min
1
median
3
mean
2.35
max
6

domain_id

string_text
min
7
median
7
mean
7
max
7

domain_index

int
min
0
median
1
mean
1.14
max
20

domain_length

int
min
9
median
136
mean
160.90
max
1,221

domain_suffix

string_label
  • 0034%
  • 0132%
  • 0224%

homologous_superfamily_code

string_text
min
9
median
11
mean
10.96
max
13

homologous_superfamily_example_domain_id

string_text
min
7
median
7
mean
7
max
7

homologous_superfamily_name

string_text
min
0
median
28
mean
27.68
max
107

homologous_superfamily_number

int
min
1
median
10
mean
362.31
max
12,820

in_s100_nonredundant_subset

bool
  • False80%
  • True20%

in_s35_nonredundant_subset

bool
  • False94%
  • True6%

in_s60_nonredundant_subset

bool
  • False91%
  • True9%

in_s95_nonredundant_subset

bool
  • False88%
  • True12%

pdb_chain_id

string_text
min
5
median
5
mean
5
max
5

pdb_id

string_text
min
4
median
4
mean
4
max
4

raw_structure_resolution_angstrom

float
min
0.48
median
2.39
mean
66.38
max
1,000

s100_cluster_id

int
min
1
median
1
mean
2.34
max
214

s100_sequence_count

int
min
1
median
5
mean
37.08
max
2,120

s35_cluster_id

int
min
1
median
8
mean
46.93
max
1,117

s35_cluster_key

string_text
min
15
median
18
mean
17.56
max
20

s60_cluster_id

int
min
1
median
1
mean
1.47
max
21

s95_cluster_id

int
min
1
median
1
mean
2.26
max
211

sequence

string_text
min
9
median
141
mean
165.50
max
1,275

sequence_length

int
min
9
median
141
mean
165.50
max
1,275

sequence_range

string_text
min
4
median
6
mean
7.14
max
47

sequence_range_end

int
min
-112
median
246
mean
320.14
max
9,140

sequence_range_start

int
min
-369
median
26
mean
137.45
max
9,098

sequence_segment_count

int
min
1
median
1
mean
1.16
max
6

structure_resolution_angstrom

float
min
0.48
median
2.35
mean
51.45
max
1,000

1.6% empty

structure_resolution_is_unknown

bool
  • False98%
  • True2%

topology_code

string_text
min
6
median
7
mean
7.58
max
9

topology_example_domain_id

string_text
min
7
median
7
mean
7
max
7

topology_name

string_text
min
3
median
22
mean
27.69
max
109

topology_number

int
min
4
median
70
mean
302.68
max
4,200